Applying a Filter to a Time-Series#
This example demonstrates low pass filtering a time-series by applying a weighted running mean over the time dimension.
The time-series used is the Darwin-only Southern Oscillation index (SOI), which is filtered using two different Lanczos filters, one to filter out time-scales of less than two years and one to filter out time-scales of less than 7 years.
Duchon C. E. (1979) Lanczos Filtering in One and Two Dimensions. Journal of Applied Meteorology, Vol 18, pp 1016-1022.
Trenberth K. E. (1984) Signal Versus Noise in the Southern Oscillation. Monthly Weather Review, Vol 112, pp 326-332
import matplotlib.pyplot as plt import numpy as np import iris import iris.plot as iplt def low_pass_weights(window, cutoff): """Calculate weights for a low pass Lanczos filter. Args: window: int The length of the filter window. cutoff: float The cutoff frequency in inverse time steps. """ order = ((window - 1) // 2) + 1 nwts = 2 * order + 1 w = np.zeros([nwts]) n = nwts // 2 w[n] = 2 * cutoff k = np.arange(1.0, n) sigma = np.sin(np.pi * k / n) * n / (np.pi * k) firstfactor = np.sin(2.0 * np.pi * cutoff * k) / (np.pi * k) w[n - 1 : 0 : -1] = firstfactor * sigma w[n + 1 : -1] = firstfactor * sigma return w[1:-1] def main(): # Load the monthly-valued Southern Oscillation Index (SOI) time-series. fname = iris.sample_data_path("SOI_Darwin.nc") soi = iris.load_cube(fname) # Window length for filters. window = 121 # Construct 2-year (24-month) and 7-year (84-month) low pass filters # for the SOI data which is monthly. wgts24 = low_pass_weights(window, 1.0 / 24.0) wgts84 = low_pass_weights(window, 1.0 / 84.0) # Apply each filter using the rolling_window method used with the weights # keyword argument. A weighted sum is required because the magnitude of # the weights are just as important as their relative sizes. soi24 = soi.rolling_window( "time", iris.analysis.SUM, len(wgts24), weights=wgts24 ) soi84 = soi.rolling_window( "time", iris.analysis.SUM, len(wgts84), weights=wgts84 ) # Plot the SOI time series and both filtered versions. plt.figure(figsize=(9, 4)) iplt.plot( soi, color="0.7", linewidth=1.0, linestyle="-", alpha=1.0, label="no filter", ) iplt.plot( soi24, color="b", linewidth=2.0, linestyle="-", alpha=0.7, label="2-year filter", ) iplt.plot( soi84, color="r", linewidth=2.0, linestyle="-", alpha=0.7, label="7-year filter", ) plt.ylim([-4, 4]) plt.title("Southern Oscillation Index (Darwin Only)") plt.xlabel("Time") plt.ylabel("SOI") plt.legend(fontsize=10) iplt.show() if __name__ == "__main__": main()
Total running time of the script: ( 0 minutes 0.847 seconds)